In Vivo 2-Photon Imaging of Blood Flow Dynamics



Blood Vessels
3D reconstruction of 2-photon images taken of cortical blood vessels in a postnatal day 6 mouse.

One of our goals is to study how neuronal plasticity contributes to functional recovery after stroke. We therefore image chronically the dendrites and axons of Layer 2/3 and Layer 5 pyramidal neurons in peri-infarct cortex, over several months, before and after occlusion of the mdidle cerebral atery on one side.

Importantly, we want to correlate changes in neuronal structure with changes in local blood flow within peri-infarct cortex. To do so, we inject large fluorescent-dextran dye molecules into the peripheral vasculature. Since these dyes cannot cross the blood brain barrier, they highlight large and small vessels in the cortex, which can then be imaged in vivo through a cranial window.

Using high resolution 2-photon microscopy we can zoom in and image individual capillaries, which appear white because they are filled with the fluorescent dye, except for small dark stripes, which of course correspond to individual red blood cells traveling through the capillaries and displacing the fluorescent dye. Capillaries
Sweep of blood vessels By doing line scans along the length of a capillary, we can produce x-t images, where the path of single RBCs is revealed. From these "sweeps" across single blood vessels, we can calculate the number of RBCs traveling per unit time (by counting the number of stripes in the sweep) and their velocity (by calculating the slope of the stripe path).
 
 
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